Description

synaptic Ras GTPase activating protein 1 homolog (rat)

Location
About this transcript

This transcript has 21 exons and is annotated with 15 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
SYNGAP1-001OTTHUMT00000076151.598621343aaOTTHUMP00000029119
 
Protein coding
CCDS34434Q96PV0
SYNGAP1-010OTTHUMT00000342678.258281285aaOTTHUMP00000278516
 
Protein coding
--
SYNGAP1-003OTTHUMT00000258901.143391284aaOTTHUMP00000165802
 
Protein coding
--
SYNGAP1-007OTTHUMT00000258905.342641299aaOTTHUMP00000275564
 
Protein coding
--
SYNGAP1-009OTTHUMT00000342677.439301306aaOTTHUMP00000209046
 
Protein coding
-B7ZCA0 CDS 3' incomplete
SYNGAP1-025OTTHUMT00000490352.112325aaOTTHUMP00000282657
 
Protein coding
--CDS 3' incomplete
SYNGAP1-006OTTHUMT00000342676.21912No protein-
 
Artifact
--
SYNGAP1-005OTTHUMT00000258903.28162592aaOTTHUMP00000282656
 
Nonsense mediated decay
--
SYNGAP1-004OTTHUMT00000258902.445561284aaOTTHUMP00000275563
 
Nonsense mediated decay
-A0A0A0MQZ2 CDS 5' incomplete
SYNGAP1-019OTTHUMT00000490347.1191No protein-
 
Processed transcript
--
SYNGAP1-024OTTHUMT00000490351.1190No protein-
 
Processed transcript
--
SYNGAP1-014OTTHUMT00000490339.1161No protein-
 
Processed transcript
--
SYNGAP1-030OTTHUMT00000490357.1161No protein-
 
Processed transcript
--
SYNGAP1-012OTTHUMT00000490341.1157No protein-
 
Processed transcript
--
SYNGAP1-016OTTHUMT00000490340.1148No protein-
 
Processed transcript
--
SYNGAP1-021OTTHUMT00000490344.1148No protein-
 
Processed transcript
--
SYNGAP1-013OTTHUMT00000490342.1132No protein-
 
Processed transcript
--
SYNGAP1-027OTTHUMT00000490354.1118No protein-
 
Processed transcript
--
SYNGAP1-011OTTHUMT00000490338.1100No protein-
 
Processed transcript
--
SYNGAP1-017OTTHUMT00000490345.1100No protein-
 
Processed transcript
--
SYNGAP1-018OTTHUMT00000490346.1100No protein-
 
Processed transcript
--
SYNGAP1-022OTTHUMT00000490349.1100No protein-
 
Processed transcript
--
SYNGAP1-023OTTHUMT00000490350.1100No protein-
 
Processed transcript
--
SYNGAP1-026OTTHUMT00000490353.1100No protein-
 
Processed transcript
--
SYNGAP1-028OTTHUMT00000490355.1100No protein-
 
Processed transcript
--
SYNGAP1-029OTTHUMT00000490356.1100No protein-
 
Processed transcript
--
SYNGAP1-020OTTHUMT00000490348.179No protein-
 
Processed transcript
--
SYNGAP1-002OTTHUMT00000258900.42073No protein-
 
Retained intron
--
SYNGAP1-008OTTHUMT00000258906.1394No protein-
 
Retained intron
--
Statistics

Exons: 21 Transcript length: 8,162 bps Translation length: 592 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 15/02/2016 (Created on 07/04/2006)

Alternative symbols

XXbac-BPG294E21.1-005

Annotation Attributes

RNA-Seq supported partial [Definitions]

Other assemblies

This transcript maps to 33,419,909-33,455,748 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays