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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: Col28a1 OTTMUSG00000022693

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Description

collagen type XXVIII alpha 1

Location

Chromosome 6: 7,997,808-8,192,617 reverse strand.

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Col28a1-001	OTTMUST00000054427.1	4230	1141aa	OTTMUSP00000025976	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS39424	Q2UY11
Col28a1-005	OTTMUST00000151864.1	749	234aa	OTTMUSP00000078729	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Col28a1-004	OTTMUST00000140396.1	3787	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Col28a1-003	OTTMUST00000054429.1	214	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Col28a1-002	OTTMUST00000054428.1	708	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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