Transcript: Vps25-001 OTTMUST00000005502.1

Description

vacuolar protein sorting 25 (yeast)

Location

About this transcript

This transcript has 6 exons and is annotated with 8 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Vps25-003	OTTMUST00000005504.2	1220	172aa	OTTMUSP00000002619	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS70313	-
Vps25-001	OTTMUST00000005502.1	1106	176aa	OTTMUSP00000002617	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS25458	Q9CQ80
Vps25-007	OTTMUST00000005508.2	876	184aa	OTTMUSP00000002620	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS70311	A2A4J8
Vps25-002	OTTMUST00000005503.3	615	148aa	OTTMUSP00000002618	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS70312	-
Vps25-004	OTTMUST00000005505.2	790	128aa	OTTMUSP00000037367	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Vps25-006	OTTMUST00000005507.2	361	91aa	OTTMUSP00000052150	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Vps25-005	OTTMUST00000005506.3	844	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 1,106 bps Translation length: 176 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25458

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 14/07/2004)

Alternative symbols

RP23-281C18.7-001

Remarks

0610010M07Rik

1110014N10Rik

1500004I10Rik

G730029E01Rik

I830015L09Rik

NP_081052.2

Other assemblies

This transcript maps to 101,253,707-101,259,549 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000042477

Curation Method

Manual annotation from Havana