Transcript: Emid1-003 OTTMUST00000011364.2

Description

EMI domain containing 1

Location

Chromosome 11: 5,131,975-5,152,237 reverse strand.

About this transcript

This transcript has 7 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000005081 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Emid1-001	OTTMUST00000011362.1	1947	444aa	OTTMUSP00000005297	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS24398	Q5SUT2
Emid1-002	OTTMUST00000011363.1	1248	223aa	OTTMUSP00000005298	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6YMU2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Emid1-005	OTTMUST00000011366.2	1061	116aa	OTTMUSP00000047535	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6U7K9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Emid1-003	OTTMUST00000011364.2	639	157aa	OTTMUSP00000047533	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E0CY77
Emid1-004	OTTMUST00000011365.2	362	55aa	OTTMUSP00000047534	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F7BCQ7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Emid1-007	OTTMUST00000011368.2	605	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Emid1-006	OTTMUST00000011367.2	649	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 639 bps Translation length: 157 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 01/10/2013 (Created on 21/07/2003)

Alternative symbols

RP23-338J18.3-003

Remarks

novel transcript

Other assemblies

This transcript maps to 5,131,975-5,152,237 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000156492

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Emid1-003 OTTMUST00000011364.2

Summary

Transcript-based displays