Transcript: Cpsf3l-003 OTTMUST00000025531.2

Description

cleavage and polyadenylation specific factor 3-like

Location

About this transcript

This transcript has 9 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Cpsf3l-001	OTTMUST00000025529.1	2368	600aa	OTTMUSP00000011688	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19048	Q9CWS4
Cpsf3l-004	OTTMUST00000071469.2	1884	578aa	OTTMUSP00000036624	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Cpsf3l-003	OTTMUST00000025531.2	880	94aa	OTTMUSP00000036625	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Cpsf3l-005	OTTMUST00000071470.1	2197	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Cpsf3l-007	OTTMUST00000071472.1	517	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Cpsf3l-006	OTTMUST00000071471.1	481	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Cpsf3l-002	OTTMUST00000025530.1	340	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 880 bps Translation length: 94 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/03/2012 (Created on 29/04/2005)

Alternative symbols

RP23-242K15.19-003

Other assemblies

This transcript maps to 155,869,615-155,886,919 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000156460

Curation Method

Manual annotation from Havana