Transcript: Itga8-007 OTTMUST00000097218.1

Description

integrin alpha 8

Location

About this transcript

This transcript has 31 exons and is annotated with 29 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Itga8-001	OTTMUST00000026594.4	5812	1062aa	OTTMUSP00000012160	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS15689	A2ARA8
Itga8-006	OTTMUST00000026599.2	491	133aa	OTTMUSP00000054481	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3UYV5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Itga8-007	OTTMUST00000097218.1	4948	590aa	OTTMUSP00000054480	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	G3UYN5
Itga8-005	OTTMUST00000097219.2	924	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Itga8-003	OTTMUST00000026596.2	885	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Itga8-002	OTTMUST00000026595.2	1265	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Itga8-004	OTTMUST00000026597.1	488	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 31 Transcript length: 4,948 bps Translation length: 590 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 24/03/2011)

Alternative symbols

RP23-202C2.1-007

Other assemblies

This transcript maps to 12,107,479-12,301,892 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000172791

Curation Method

Manual annotation from Havana