Transcript: Tor1b-004 OTTMUST00000027998.2

Description

torsin family 1, member B

Location

Chromosome 2: 30,952,991-30,956,494 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000011877 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Tor1b-001	OTTMUST00000027995.2	3039	336aa	OTTMUSP00000012698	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS15890	Q9ER41
Tor1b-002	OTTMUST00000027996.2	2809	122aa	OTTMUSP00000044926	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6VK94	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Tor1b-004	OTTMUST00000027998.2	732	179aa	OTTMUSP00000044927	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6REF0
Tor1b-006	OTTMUST00000028001.2	507	68aa	OTTMUSP00000044929	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6ZDX6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Tor1b-007	OTTMUST00000129525.1	892	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Tor1b-003	OTTMUST00000027997.2	4775	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Tor1b-005	OTTMUST00000027999.3	1324	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 732 bps Translation length: 179 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/03/2012 (Created on 23/05/2005)

Alternative symbols

RP23-221O14.8-004

Other assemblies

This transcript maps to 30,952,991-30,956,494 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000135507

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Tor1b-004 OTTMUST00000027998.2

Summary

Transcript-based displays