Transcript: Tspyl2-005 OTTMUST00000111852.1

Description

TSPY-like 2

Location

About this transcript

This transcript has 6 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Tspyl2-001	OTTMUST00000047169.1	2696	677aa	OTTMUSP00000021304	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS30474	Q7TQI8
Tspyl2-005	OTTMUST00000111852.1	841	120aa	OTTMUSP00000062702	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	J3QP69	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Tspyl2-002	OTTMUST00000047170.1	2804	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Tspyl2-003	OTTMUST00000047171.1	2658	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Tspyl2-004	OTTMUST00000111853.1	391	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 841 bps Translation length: 120 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 21/02/2012)

Alternative symbols

RP23-147K15.1-005

Annotation Attributes

not organism-supported [Definitions]

Remarks

non canonical conserved

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 152,339,301-152,341,844 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000178165

Curation Method

Manual annotation from Havana