Description

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A

Location
About this transcript

This transcript has 15 exons and is annotated with 17 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Sema4a-001OTTMUST00000050356.23205760aaOTTMUSP00000023497
 
Protein coding
CCDS17475Q62178
Sema4a-002OTTMUST00000050357.12897628aaOTTMUSP00000023498
 
Protein coding
-D3YWV5
Sema4a-004OTTMUST00000050359.2845233aaOTTMUSP00000023500
 
Protein coding
-D3YZ30 CDS 3' incomplete
Sema4a-005OTTMUST00000050360.2706203aaOTTMUSP00000023501
 
Protein coding
-D3YUM4 CDS 3' incomplete
Sema4a-003OTTMUST00000050358.263060aaOTTMUSP00000023499
 
Protein coding
-D3YVM6 CDS 3' incomplete
Sema4a-011OTTMUST00000050366.2506113aaOTTMUSP00000023503
 
Protein coding
-D3Z336 CDS 3' incomplete
Sema4a-010OTTMUST00000050365.338517aaOTTMUSP00000023502
 
Protein coding
-D3YWK5 CDS 3' incomplete
Sema4a-008OTTMUST00000050363.2866170aaOTTMUSP00000065316
 
Nonsense mediated decay
-V9GXF5
Sema4a-009OTTMUST00000050364.2748180aaOTTMUSP00000065317
 
Nonsense mediated decay
-V9GXH9
Sema4a-007OTTMUST00000050362.269947aaOTTMUSP00000065315
 
Nonsense mediated decay
-V9GWW2 CDS 5' incomplete
Sema4a-012OTTMUST00000050367.1371No protein-
 
Processed transcript
--
Sema4a-015OTTMUST00000050370.12487No protein-
 
Retained intron
--
Sema4a-014OTTMUST00000050369.12357No protein-
 
Retained intron
--
Sema4a-016OTTMUST00000050371.12108No protein-
 
Retained intron
--
Sema4a-006OTTMUST00000050361.1713No protein-
 
Retained intron
--
Sema4a-013OTTMUST00000050368.1465No protein-
 
Retained intron
--
Statistics

Exons: 15 Transcript length: 3,205 bps Translation length: 760 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS17475

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 05/02/2013 (Created on 25/10/2006)

Alternative symbols

AC102388.1-001

Remarks

6030492A12Rik

alternative 5' UTR

F630026I17Rik

I830083E12Rik

I830125N01Rik

Other assemblies

This transcript maps to 88,435,959-88,455,739 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays