Transcript: Col3a1-007 OTTMUST00000121027.2

Description

procollagen type III alpha 1

Location

Chromosome 1: 45,339,958-45,347,766 forward strand.

About this transcript

This transcript has 6 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000021335 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Col3a1-001	OTTMUST00000050577.1	5564	1464aa	OTTMUSP00000023637	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS35554	Q3TVI5
Col3a1-007	OTTMUST00000121027.2	737	245aa	OTTMUSP00000066828	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WPJ5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Col3a1-006	OTTMUST00000121026.2	583	195aa	OTTMUSP00000066827	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Col3a1-004	OTTMUST00000121024.1	1610	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Col3a1-002	OTTMUST00000050578.1	3159	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Col3a1-003	OTTMUST00000050579.1	570	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Col3a1-005	OTTMUST00000121025.1	431	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 737 bps Translation length: 245 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 16/12/2013)

Alternative symbols

AC125167.1-007

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 45,339,958-45,347,766 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000186021

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Col3a1-007 OTTMUST00000121027.2

Summary

Transcript-based displays