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Description

Swi/SNF related matrix associated actin dependent regulator of chromatin subfamily a-like 1

Location
About this transcript

This transcript has 17 exons and is annotated with 14 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Smarcal1-001OTTMUST000000509503059910aaOTTMUSP00000023911
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35609Q8BJL0
Smarcal1-006OTTMUST000000509552994910aaOTTMUSP00000062986
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35609Q8BJL0
Smarcal1-008OTTMUST00000050957828194aaOTTMUSP00000023914
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YUX5 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Smarcal1-007OTTMUST0000005095657999aaOTTMUSP00000023913
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z0J8 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Smarcal1-004OTTMUST000000509534003No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Smarcal1-005OTTMUST000000509542818No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Smarcal1-003OTTMUST000000509522237No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Smarcal1-002OTTMUST000000509511754No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Smarcal1-010OTTMUST00000050959542No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 17 Transcript length: 3,059 bps Translation length: 910 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS35609

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 25/04/2012 (Created on 14/11/2006)

Alternative symbols

AC115026.1-001

Remarks

NP_061287

Other assemblies

This transcript maps to 72,583,251-72,633,134 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays