Transcript: Slc35f6-003 OTTMUST00000053079.2

Description

solute carrier family 35, member F6

Location

Chromosome 5: 30,648,012-30,658,191 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000022284 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Slc35f6-001	OTTMUST00000053077.3	3088	372aa	OTTMUSP00000025220	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19161	Q8VE96
Slc35f6-007	OTTMUST00000136724.1	1972	319aa	OTTMUSP00000072124	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0G2JEG3
Slc35f6-006	OTTMUST00000135853.1	529	40aa	OTTMUSP00000071819	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0G2JEP3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Slc35f6-002	OTTMUST00000053078.2	1443	55aa	OTTMUSP00000038789	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RFU7
Slc35f6-003	OTTMUST00000053079.2	1299	51aa	OTTMUSP00000038790	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RHL1
Slc35f6-005	OTTMUST00000135779.2	5332	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Slc35f6-004	OTTMUST00000053132.1	802	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 1,299 bps Translation length: 51 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 03/11/2014 (Created on 09/01/2007)

Alternative symbols

AC105298.2-003

Other assemblies

This transcript maps to 30,648,012-30,658,191 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000124474

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Slc35f6-003 OTTMUST00000053079.2

Summary

Transcript-based displays