Transcript: Jmjd8-007 OTTMUST00000073410.2

Description

jumonji domain containing 8

Location

Chromosome 17: 25,829,071-25,830,625 forward strand.

About this transcript

This transcript has 9 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000029400 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Jmjd8-001	OTTMUST00000072861.3	2265	316aa	OTTMUSP00000037606	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q3TA59
Jmjd8-003	OTTMUST00000072919.2	831	220aa	OTTMUSP00000039187	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Jmjd8-007	OTTMUST00000073410.2	790	187aa	OTTMUSP00000037985	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Jmjd8-005	OTTMUST00000072921.1	865	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Jmjd8-004	OTTMUST00000072920.2	754	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Jmjd8-002	OTTMUST00000072918.2	622	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Jmjd8-006	OTTMUST00000072922.1	622	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 790 bps Translation length: 187 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/03/2012 (Created on 05/11/2007)

Alternative symbols

RP23-356J2.3-007

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 25,829,071-25,830,625 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000152434

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Jmjd8-007 OTTMUST00000073410.2

Summary

Transcript-based displays