Transcript: Ankrd54-007 OTTMUST00000074250.1

Description

ankyrin repeat domain 54

Location

Chromosome 15: 79,053,768-79,055,344 reverse strand.

About this transcript

This transcript has 3 exons and is annotated with 1 domain and feature.

Gene

This transcript is a product of gene OTTMUSG00000029926 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Ankrd54-001	OTTMUST00000074244.1	1904	299aa	OTTMUSP00000038566	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS37139	A7YB12
Ankrd54-006	OTTMUST00000074249.1	790	83aa	OTTMUSP00000038569	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6QTQ3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Ankrd54-004	OTTMUST00000074247.2	687	200aa	OTTMUSP00000038567	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B7ZBY0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Ankrd54-007	OTTMUST00000074250.1	502	86aa	OTTMUSP00000038570	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6UYM2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Ankrd54-005	OTTMUST00000074248.1	628	137aa	OTTMUSP00000038568	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6REF6
Ankrd54-002	OTTMUST00000074245.1	2582	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Ankrd54-003	OTTMUST00000074246.1	2012	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 502 bps Translation length: 86 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 20/11/2007)

Alternative symbols

RP23-414K1.2-007

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 79,053,768-79,055,344 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000125523

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: Ankrd54-007 OTTMUST00000074250.1

Summary

Transcript-based displays