Transcript: Tmem120b-004 OTTMUST00000076244.3

Description

transmembrane protein 120B

Location

Chromosome 5: 123,076,325-123,115,127 forward strand.

About this transcript

This transcript has 9 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000030808 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Tmem120b-001	OTTMUST00000076241.1	2164	339aa	OTTMUSP00000040108	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS39262	Q3TA38
Tmem120b-002	OTTMUST00000076242.1	1256	300aa	OTTMUSP00000040109	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Tmem120b-007	OTTMUST00000079288.3	448	120aa	OTTMUSP00000043024	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CX33	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Tmem120b-004	OTTMUST00000076244.3	823	109aa	OTTMUSP00000041251	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E0CYA8
Tmem120b-008	OTTMUST00000079289.2	754	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Tmem120b-003	OTTMUST00000076243.1	777	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Tmem120b-005	OTTMUST00000076245.1	703	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Tmem120b-006	OTTMUST00000076246.1	679	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 823 bps Translation length: 109 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 10/03/2012 (Created on 14/01/2008)

Alternative symbols

AC158114.6-004

Other assemblies

This transcript maps to 123,076,325-123,115,127 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000161059

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Tmem120b-004 OTTMUST00000076244.3

Summary

Transcript-based displays