Transcript: Arhgef4-008 OTTMUST00000147528.1

Description

Rho guanine nucleotide exchange factor (GEF) 4

Location

Chromosome 1: 34,801,794-34,801,964 forward strand.

About this transcript

This transcript has 1 exon and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000033276 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Arhgef4-001	OTTMUST00000083450.6	3287	484aa	OTTMUSP00000044853	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14872	Q7TNR9
Arhgef4-004	OTTMUST00000083453.2	6514	1855aa	OTTMUSP00000044854	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PYK8
Arhgef4-005	OTTMUST00000083454.3	1887	628aa	OTTMUSP00000044855	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CX56	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Arhgef4-006	OTTMUST00000083455.4	906	190aa	OTTMUSP00000045012	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CY60	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Arhgef4-008	OTTMUST00000147528.1	171	56aa	OTTMUSP00000076781	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A1B0GST8
Arhgef4-003	OTTMUST00000083452.2	2339	216aa	OTTMUSP00000045425	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E0CYG8
Arhgef4-002	OTTMUST00000083451.2	2981	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Arhgef4-007	OTTMUST00000083469.1	1024	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 1 Transcript length: 171 bps Translation length: 56 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/10/2015 (Created on 28/10/2015)

Alternative symbols

AC107738.3-008

Annotation Attributes

non-submitted evidence [Definitions]

Remarks

this CDS is conserved in vertebrates

Other assemblies

This transcript maps to 34,801,794-34,801,964 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000211073

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Arhgef4-008 OTTMUST00000147528.1

Summary

Transcript-based displays