Transcript: Col22a1-001 OTTMUST00000084152.3

Description

collagen, type XXII, alpha 1

Location

About this transcript

This transcript has 64 exons and is annotated with 46 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Col22a1-001	OTTMUST00000084152.3	8809	1613aa	OTTMUSP00000045312	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS49627	E9Q7P1
Col22a1-003	OTTMUST00000054282.5	688	162aa	OTTMUSP00000025892	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CYH5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Col22a1-004	OTTMUST00000084227.1	659	203aa	OTTMUSP00000045366	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6TGL6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Col22a1-002	OTTMUST00000054338.1	1210	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 64 Transcript length: 8,809 bps Translation length: 1,613 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS49627

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 02/10/2013 (Created on 29/08/2008)

Alternative symbols

AC123689.1-001

Remarks

2310067L16Rik

XP_001499245 (Eca)

XP_243609 (Rno)

XP_539177 (Cfa)

Other assemblies

This transcript maps to 71,795,795-72,034,227 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000159993

Curation Method

Manual annotation from Havana