Transcript: AC129188.1-007 OTTMUST00000121477.1

Description

novel protein, orthologue of human chromosome 11 open reading frame 95 C11orf95 (2700081O15Rik)

Location

Chromosome 19: 7,420,409-7,422,672 forward strand.

About this transcript

This transcript has 3 exons and is annotated with 1 domain and feature.

Gene

This transcript is a product of gene OTTMUSG00000034222 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
AC129188.1-002	OTTMUST00000086882.1	4989	678aa	OTTMUSP00000047094	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS29524	Q4VA45
AC129188.1-004	OTTMUST00000086884.2	1168	311aa	OTTMUSP00000066920	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
AC129188.1-005	OTTMUST00000086885.2	821	274aa	OTTMUSP00000047095	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
AC129188.1-003	OTTMUST00000086883.2	4028	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
AC129188.1-007	OTTMUST00000121477.1	355	37aa	OTTMUSP00000066921	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
AC129188.1-001	OTTMUST00000086881.2	4064	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
AC129188.1-006	OTTMUST00000121476.1	2372	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 355 bps Translation length: 37 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 07/01/2014 (Created on 07/01/2014)

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 7,420,409-7,422,672 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000191580

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: AC129188.1-007 OTTMUST00000121477.1

Summary

Transcript-based displays