Transcript: Bace1-004 OTTMUST00000088893.1

Description

beta-site APP cleaving enzyme 1

Location

About this transcript

This transcript has 5 exons and is annotated with 10 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Bace1-001	OTTMUST00000088890.1	6058	501aa	OTTMUSP00000048510	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23135	P56818
Bace1-002	OTTMUST00000088891.1	4041	467aa	OTTMUSP00000048511	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52784	Q8C4F4
Bace1-006	OTTMUST00000088917.1	1148	360aa	OTTMUSP00000048529	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6TV37	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Bace1-004	OTTMUST00000088893.1	365	65aa	OTTMUSP00000048512	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6UH57	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Bace1-005	OTTMUST00000088894.1	295	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Bace1-003	OTTMUST00000088892.1	3146	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 365 bps Translation length: 65 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/09/2012 (Created on 20/08/2009)

Alternative symbols

RP23-3F1.2-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 45,839,240-45,857,173 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000159499

Curation Method

Manual annotation from Havana