Transcript: Slc22a13b-ps-001 OTTMUST00000090304.1

Description

solute carrier family 22 (organic cation transporter), member 13b

Location

Chromosome 9: 119,220,488-119,231,692 reverse strand.

About this transcript

This transcript has 6 exons.

Gene

This transcript is a product of gene OTTMUSG00000035361 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
Slc22a13b-ps-001	OTTMUST00000090304.1	1458	371aa	OTTMUSP00000049508	<p>Pseudogene loci in one genome (e.g. the reference) but coding in other genomes (i.e. non-reference) due to short or large scale genomic variation in some individuals/haplotypes/strains in a given population/species. It can be known elsewhere as segregating pseudogenes or SPGs.</p>Polymorphic pseudogene	-

Summary

Statistics

Exons: 6 Transcript length: 1,458 bps Translation length: 371 residues

Class

polymorphic pseudogene [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 21/03/2012 (Created on 04/02/2010)

Alternative symbols

RP23-129C12.5-001

Remarks

SNP rs29642637 (A/G) at the location of the stop codon (TGA) in the second exon, means that in some individuals this codon is CGA and codes for arginine. These individuals would produce a longer protein since the downstream AUG is also in this frame. The SNP data is 7:9 for coding:non-coding in different strains

Other assemblies

This transcript maps to 119,220,488-119,231,692 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000173185

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Slc22a13b-ps-001 OTTMUST00000090304.1

Summary

Transcript-based displays