MouseVega Home

Updated annotation available

There is updated annotation for this transcript available here.

Description

choline kinase beta

Location
About this transcript

This transcript has 11 exons and is annotated with 6 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Chkb-001OTTMUST000000906141707394aaOTTMUSP00000049745
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS27750O55229
Chkb-009OTTMUST00000090619529176aaOTTMUSP00000049747
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6RRT7 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Chkb-008OTTMUST00000090615808164aaOTTMUSP00000049746
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F6SKI6 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Chkb-010OTTMUST00000090611469No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Chkb-002OTTMUST000000906104296No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Chkb-005OTTMUST000000906172455No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Chkb-003OTTMUST000000906122063No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Chkb-004OTTMUST000000906131416No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Chkb-007OTTMUST00000090618839No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Chkb-006OTTMUST00000090616543No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 11 Transcript length: 1,707 bps Translation length: 394 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27750

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 02/03/2010)

Alternative symbols

RP24-460O22.4-001

Other assemblies

This transcript maps to 89,426,367-89,429,899 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays