Transcript: Oaz1-003 OTTMUST00000111592.2

Description

ornithine decarboxylase antizyme 1

Location

Chromosome 10: 80,826,683-80,828,957 forward strand.

About this transcript

This transcript has 6 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000042344 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Oaz1-001	OTTMUST00000111593.1	1044	227aa	OTTMUSP00000062508	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS56736	P54369
Oaz1-005	OTTMUST00000111594.1	744	166aa	OTTMUSP00000062509	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3QM96
Oaz1-003	OTTMUST00000111592.2	708	210aa	OTTMUSP00000062507	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3QMV2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Oaz1-004	OTTMUST00000111595.2	538	177aa	OTTMUSP00000062510	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3QM60	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Oaz1-006	OTTMUST00000111596.1	520	49aa	OTTMUSP00000062511	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3QME8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Oaz1-002	OTTMUST00000111591.1	2526	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 708 bps Translation length: 210 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 16/01/2012)

Alternative symbols

RP24-121A12.4-003

Remarks

[PMID:17332016]: "Ribosomes synthesizing antizyme start in one ORF and at the codon 5' adjacent to its stop codon, shift +1 to a second and partially overlapping ORF which encodes most of the protein. The ribosomal frameshifting is a sensor and effector of an autoregulatory circuit which is conserved in animals, fungi and protists. Stimulatory signals encoded 5' and 3' of the shift site act to program the frameshifting"; built with 1bp gap in exon 2 to represent the frameshift event

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 80,826,683-80,828,957 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000177850

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Oaz1-003 OTTMUST00000111592.2

Summary

Transcript-based displays