Transcript: Rexo1-005 OTTMUST00000114369.1

Description

REX1, RNA exonuclease 1 homolog (S. cerevisiae)

Location

Chromosome 10: 80,545,997-80,549,462 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 1 domain and feature.

Gene

This transcript is a product of gene OTTMUSG00000043566 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Rexo1-001	OTTMUST00000114363.3	5250	1213aa	OTTMUSP00000063823	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS24025	Q7TT28
Rexo1-007	OTTMUST00000114368.1	2338	536aa	OTTMUSP00000063825	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	S4R246	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Rexo1-005	OTTMUST00000114369.1	889	52aa	OTTMUSP00000063826	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Rexo1-008	OTTMUST00000114371.1	741	93aa	OTTMUSP00000063827	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Rexo1-006	OTTMUST00000114370.1	709	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Rexo1-004	OTTMUST00000114367.1	3533	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Rexo1-002	OTTMUST00000114365.1	1914	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Rexo1-003	OTTMUST00000114364.1	1561	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 889 bps Translation length: 52 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 04/12/2012 (Created on 04/12/2012)

Alternative symbols

RP24-327D15.3-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 80,545,997-80,549,462 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000183073

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Rexo1-005 OTTMUST00000114369.1

Summary

Transcript-based displays