Transcript: U2surp-001 OTTMUST00000121759.1

Description

U2 snRNP-associated SURP domain containing

Location

Chromosome 9: 95,460,978-95,511,996 reverse strand.

About this transcript

This transcript has 27 exons and is annotated with 29 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000047001 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
U2surp-002	OTTMUST00000121758.1	7630	1029aa	OTTMUSP00000066994	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52889	Q6NV83
U2surp-001	OTTMUST00000121759.1	3520	985aa	OTTMUSP00000066995	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS40727	-
U2surp-010	OTTMUST00000154795.1	3111	1028aa	OTTMUSP00000079984	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
U2surp-005	OTTMUST00000121763.2	612	204aa	OTTMUSP00000066998	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
U2surp-006	OTTMUST00000121764.2	231	77aa	OTTMUSP00000066999	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
U2surp-009	OTTMUST00000121760.1	3231	425aa	OTTMUSP00000066996	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A087WRG2
U2surp-007	OTTMUST00000121761.1	3858	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
U2surp-008	OTTMUST00000121766.1	2846	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
U2surp-004	OTTMUST00000121765.1	650	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 27 Transcript length: 3,520 bps Translation length: 985 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40727

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2014 (Created on 10/01/2014)

Alternative symbols

RP23-260J19.2-001

Other assemblies

This transcript maps to 95,460,978-95,511,996 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000078374

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: U2surp-001 OTTMUST00000121759.1

Summary

Transcript-based displays