Transcript: Cdk18-006 OTTMUST00000125875.1

Description

cyclin-dependent kinase 18

Location

Chromosome 1: 132,114,831-132,116,690 reverse strand.

About this transcript

This transcript has 4 exons.

Gene

This transcript is a product of gene OTTMUSG00000049382 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cdk18-001	OTTMUST00000125871.1	4355	451aa	OTTMUSP00000068123	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS15281	Q04899
Cdk18-002	OTTMUST00000125874.1	1706	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Cdk18-005	OTTMUST00000125873.1	1096	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Cdk18-006	OTTMUST00000125875.1	404	68aa	OTTMUSP00000068124	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Cdk18-003	OTTMUST00000125872.1	839	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Cdk18-004	OTTMUST00000125876.1	509	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 404 bps Translation length: 68 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 06/03/2014 (Created on 06/03/2014)

Alternative symbols

RP24-340N18.2-006

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 132,114,831-132,116,690 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000185601

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Cdk18-006 OTTMUST00000125875.1

Summary

Transcript-based displays