Transcript: Pmf1-002 OTTMUST00000131042.1

Description

polyamine-modulated factor 1

Location

About this transcript

This transcript has 3 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pmf1-001	OTTMUST00000131043.1	1007	202aa	OTTMUSP00000070129	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38481	Q9CPV5
Pmf1-002	OTTMUST00000131042.1	795	133aa	OTTMUSP00000070128	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS79942	-
Pmf1-004	OTTMUST00000131045.1	440	81aa	OTTMUSP00000070130	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Pmf1-005	OTTMUST00000131044.1	802	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Pmf1-006	OTTMUST00000131475.1	2346	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Pmf1-007	OTTMUST00000131474.1	978	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Pmf1-003	OTTMUST00000131046.1	437	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 795 bps Translation length: 133 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS79942

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 30/07/2014 (Created on 30/07/2014)

Alternative symbols

RP24-298F19.3-002

Other assemblies

This transcript maps to 88,394,143-88,410,326 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000193338

Curation Method

Manual annotation from Havana