Transcript: Fndc4-003 OTTMUST00000137027.1

Description

fibronectin type III domain containing 4

Location

Chromosome 5: 31,292,886-31,293,713 reverse strand.

About this transcript

This transcript has 3 exons.

Gene

This transcript is a product of gene OTTMUSG00000055349 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Fndc4-001	OTTMUST00000137026.2	2333	231aa	OTTMUSP00000072219	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19181	B9EI95
Fndc4-002	OTTMUST00000137028.1	1375	231aa	OTTMUSP00000072221	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19181	B9EI95
Fndc4-004	OTTMUST00000137030.1	760	220aa	OTTMUSP00000072222	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0J9YUI2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Fndc4-006	OTTMUST00000137031.3	534	119aa	OTTMUSP00000072223	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0J9YUE6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Fndc4-003	OTTMUST00000137027.1	399	18aa	OTTMUSP00000072220	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0J9YUK8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Fndc4-007	OTTMUST00000137476.1	912	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Fndc4-005	OTTMUST00000137029.1	496	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 399 bps Translation length: 18 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 12/12/2014 (Created on 04/12/2014)

Alternative symbols

RP24-86I23.5-003

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 31,292,886-31,293,713 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000202158

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Fndc4-003 OTTMUST00000137027.1

Summary

Transcript-based displays