Transcript: Mrpl4-001 OTTMUST00000153443.1

Description

mitochondrial ribosomal protein L4

Location

Chromosome 9: 21,002,738-21,008,839 forward strand.

About this transcript

This transcript has 9 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000063045 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
Mrpl4-001	OTTMUST00000153443.1	1288	294aa	OTTMUSP00000079411	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS40548
Mrpl4-004	OTTMUST00000153448.1	815	264aa	OTTMUSP00000079414	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Mrpl4-007	OTTMUST00000153449.1	657	219aa	OTTMUSP00000079415	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Mrpl4-005	OTTMUST00000153447.1	846	172aa	OTTMUSP00000079413	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-
Mrpl4-006	OTTMUST00000153446.1	715	160aa	OTTMUSP00000079412	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-
Mrpl4-003	OTTMUST00000153452.1	305	33aa	OTTMUSP00000079416	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Mrpl4-008	OTTMUST00000153451.1	625	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
Mrpl4-002	OTTMUST00000153450.1	2317	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 9 Transcript length: 1,288 bps Translation length: 294 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40548

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 08/06/2016 (Created on 08/06/2016)

Alternative symbols

RP23-110E20.1-001

Other assemblies

This transcript maps to 21,002,738-21,008,839 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000003386

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Mrpl4-001 OTTMUST00000153443.1

Summary

Transcript-based displays