Transcript: Nlrx1-007 OTTMUST00000153960.1

Description

NLR family member X1

Location

About this transcript

This transcript has 5 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
Nlrx1-001	OTTMUST00000153956.2	3669	975aa	OTTMUSP00000079632	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23100
Nlrx1-003	OTTMUST00000153957.1	3621	975aa	OTTMUSP00000079633	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23100
Nlrx1-004	OTTMUST00000153958.1	3579	975aa	OTTMUSP00000079634	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23100
Nlrx1-006	OTTMUST00000153961.1	775	155aa	OTTMUSP00000079636	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Nlrx1-007	OTTMUST00000153960.1	678	172aa	OTTMUSP00000079635	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Nlrx1-005	OTTMUST00000153955.1	886	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-
Nlrx1-002	OTTMUST00000153959.1	3549	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 5 Transcript length: 678 bps Translation length: 172 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 22/06/2016 (Created on 22/06/2016)

Alternative symbols

RP23-162P10.6-007

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 44,263,960-44,266,531 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000217465

Curation Method

Manual annotation from Havana