Transcript: Msh2-001 OTTMUST00000098216.1

Description

mutS homolog 2 (E. coli)

Location

About this transcript

This transcript has 16 exons and is annotated with 21 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Msh2-001	OTTMUST00000098216.1	3283	935aa	OTTMUSP00000055147	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS29019	P43247
Msh2-005	OTTMUST00000098219.2	630	210aa	OTTMUSP00000055148	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3UXD8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Msh2-006	OTTMUST00000098221.1	510	68aa	OTTMUSP00000055149	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	G3UWZ8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Msh2-002	OTTMUST00000098218.1	2502	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Msh2-003	OTTMUST00000098217.1	1752	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Msh2-004	OTTMUST00000098220.1	409	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 16 Transcript length: 3,283 bps Translation length: 935 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29019

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 04/05/2011)

Alternative symbols

RP24-315D17.1-001

Remarks

CCDS29019.1

K0C0021C15Rik

NP_032654

Other assemblies

This transcript maps to 87,672,330-87,723,713 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000024967

Curation Method

Manual annotation from Havana