Transcript: Farsb-001 OTTMUST00000123030.1

Description

phenylalanyl-tRNA synthetase, beta subunit

Location

Chromosome 1: 78,425,068-78,488,897 reverse strand.

About this transcript

This transcript has 17 exons and is annotated with 14 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000047790 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Farsb-002	OTTMUST00000123029.1	2036	589aa	OTTMUSP00000067298	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS15084	Q9WUA2
Farsb-001	OTTMUST00000123030.1	1951	589aa	OTTMUSP00000067299	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS15084	Q9WUA2
Farsb-006	OTTMUST00000123032.2	970	237aa	OTTMUSP00000067301	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WPV4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Farsb-003	OTTMUST00000123034.2	619	206aa	OTTMUSP00000067302	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WS80	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Farsb-004	OTTMUST00000123031.1	1801	63aa	OTTMUSP00000067300	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Farsb-007	OTTMUST00000123033.1	449	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Farsb-005	OTTMUST00000123035.1	656	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 17 Transcript length: 1,951 bps Translation length: 589 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS15084

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 24/01/2014 (Created on 24/01/2014)

Alternative symbols

RP24-538F21.3-001

Other assemblies

This transcript maps to 78,425,068-78,488,897 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000068333

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Farsb-001 OTTMUST00000123030.1

Summary

Transcript-based displays