Transcript: ALK-001 OTTSUST00000004796.1

Description

anaplastic lymphoma receptor tyrosine kinase

Location

Chromosome 3: 116,848,108-116,923,238 forward strand.

About this transcript

This transcript has 20 exons and is annotated with 24 domains and features.

Gene

This transcript is a product of gene OTTSUSG00000002319 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
ALK-001	OTTSUST00000004796.1	3045	1008aa	OTTSUSP00000003484	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ALK-002	OTTSUST00000005281.2	285	95aa	OTTSUSP00000003918	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
ALK-003	OTTSUST00000005282.2	128	43aa	OTTSUSP00000003919	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Summary

Statistics

Exons: 20 Transcript length: 3,045 bps Translation length: 1,008 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by IRAG

Version & date

Version 1, last modified on 27/04/2012 (Created on 13/10/2010)

Alternative symbols

CH242-184D1.1-001

Remarks

not organism-supported

gene fragments CH242-184D1.-001, CH242-333D6.1-001, CH242-8N22.1-001, and CH242-184D1.2-001 are part of the same gene, the exact gene structure cannot be determined due to mis-assembly, an assembly gap contains at least 1 exon

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 116,848,108-116,923,238 in Sscrofa10.2 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSSSCT00000033256

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ALK-001 OTTSUST00000004796.1

Summary

Transcript-based displays