Transcript: ERBB2-004 OTTSUST00000007730.1

Description

v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)

Location

About this transcript

This transcript has 6 exons and is annotated with 1 domain and feature.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
ERBB2-001	OTTSUST00000007727.2	4345	1231aa	OTTSUSP00000005812	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ERBB2-003	OTTSUST00000007728.1	3442	1031aa	OTTSUSP00000005813	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ERBB2-005	OTTSUST00000007729.1	748	249aa	OTTSUSP00000005814	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
ERBB2-004	OTTSUST00000007730.1	757	72aa	OTTSUSP00000005815	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ERBB2-002	OTTSUST00000004824.1	657	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron

Summary

Statistics

Exons: 6 Transcript length: 757 bps Translation length: 72 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by IRAG

Version & date

Version 1, last modified on 27/04/2012 (Created on 08/12/2011)

Alternative symbols

CH242-251F23.1-004

Remarks

not organism-supported

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 23,060,094-23,069,842 in Sscrofa10.2 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSSSCT00000034784

Curation Method

Manual annotation from Havana