Transcript: SSR4-009 OTTSUST00000012391.1

Description

signal sequence receptor, delta (translocon-associated protein delta)

Location

Chromosome X: 142,101,857-142,105,588 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTSUSG00000004939 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
SSR4-001	OTTSUST00000012392.1	759	173aa	OTTSUSP00000008723	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding
SSR4-002	OTTSUST00000012395.1	596	172aa	OTTSUSP00000008726	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding
SSR4-010	OTTSUST00000012394.1	549	148aa	OTTSUSP00000008725	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding
SSR4-007	OTTSUST00000012393.1	545	163aa	OTTSUSP00000008724	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SSR4-003	OTTSUST00000012397.1	512	151aa	OTTSUSP00000008728	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding
SSR4-009	OTTSUST00000012391.1	446	101aa	OTTSUSP00000008722	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SSR4-005	OTTSUST00000012399.1	377	109aa	OTTSUSP00000008729	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SSR4-006	OTTSUST00000012400.1	286	80aa	OTTSUSP00000008730	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SSR4-008	OTTSUST00000012396.1	651	72aa	OTTSUSP00000008727	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
SSR4-004	OTTSUST00000012398.1	766	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron

Summary

Statistics

Exons: 5 Transcript length: 446 bps Translation length: 101 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 31/05/2012 (Created on 31/05/2012)

Alternative symbols

CH242-139K22.1-009

Remarks

alternative 5' UTR

not organism-supported

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 142,101,857-142,105,588 in Sscrofa10.2 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSSSCT00000034828

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SSR4-009 OTTSUST00000012391.1

Summary

Transcript-based displays