This is an archived version of Vega. Click here for more information.

Human

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (2)
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: TSR1 OTTHUMG00000177636

.

Description

TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)

Synonyms

FLJ10534

Location

Chromosome 17: 2,322,503-2,337,507 reverse strand.

VEGA68:CM000679.2

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TSR1-002	OTTHUMT00000438180.2	5188	804aa	OTTHUMP00000257288	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32525	Q2NL82
TSR1-007	OTTHUMT00000438601.2	1290	368aa	OTTHUMP00000257497	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	I3L1Q5
TSR1-004	OTTHUMT00000438183.1	794	70aa	OTTHUMP00000257289	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
TSR1-005	OTTHUMT00000438181.3	387	53aa	OTTHUMP00000258652	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
TSR1-001	OTTHUMT00000438184.1	573	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Summary

.

.

Gene-based displays