Transcript: LRRC16A-001 OTTHUMT00000040045.2

Description

leucine rich repeat containing 16A

Location

About this transcript

This transcript has 37 exons and is annotated with 23 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LRRC16A-001	OTTHUMT00000040045.2	5431	1371aa	OTTHUMP00000016106	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54973	Q5VZK9
LRRC16A-005	OTTHUMT00000280566.2	1290	196aa	OTTHUMP00000281142	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0U1RR91
LRRC16A-006	OTTHUMT00000487996.1	3201	932aa	OTTHUMP00000281141	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0U1RQQ1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LRRC16A-003	OTTHUMT00000040047.1	1291	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LRRC16A-002	OTTHUMT00000040046.1	707	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 37 Transcript length: 5,431 bps Translation length: 1,371 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS54973

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 05/03/2015 (Created on 27/06/2002)

Alternative symbols

RP3-501N12.1-001

Other assemblies

This transcript maps to 25,279,428-25,620,530 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000329474

Curation Method

Manual annotation from Havana