Transcript: LRRC16A-003 OTTHUMT00000040047.1

Description

leucine rich repeat containing 16A

Location

About this transcript

This transcript has 3 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LRRC16A-001	OTTHUMT00000040045.2	5431	1371aa	OTTHUMP00000016106	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54973	Q5VZK9
LRRC16A-005	OTTHUMT00000280566.2	1290	196aa	OTTHUMP00000281142	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0U1RR91
LRRC16A-006	OTTHUMT00000487996.1	3201	932aa	OTTHUMP00000281141	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0U1RQQ1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LRRC16A-003	OTTHUMT00000040047.1	1291	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LRRC16A-002	OTTHUMT00000040046.1	707	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 1,291 bps

Class

processed transcript [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 27/06/2002)

Alternative symbols

RP3-501N12.1-003

Annotation Attributes

not organism-supported [Definitions]

Other assemblies

This transcript maps to 25,610,122-25,620,530 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000476458

Curation Method

Manual annotation from Havana