Transcript: SORCS1-001 OTTHUMT00000050232.4

Description

sortilin-related VPS10 domain containing receptor 1

Location

About this transcript

This transcript has 26 exons and is annotated with 19 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SORCS1-001	OTTHUMT00000050232.4	7272	1168aa	OTTHUMP00000020446	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7559	Q8WY21
SORCS1-002	OTTHUMT00000050233.1	2638	714aa	OTTHUMP00000020447	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	X6R7D6
SORCS1-004	OTTHUMT00000050235.1	663	213aa	OTTHUMP00000020448	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C2U3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SORCS1-007	OTTHUMT00000050238.2	826	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SORCS1-005	OTTHUMT00000050236.1	629	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SORCS1-003	OTTHUMT00000050234.1	2313	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SORCS1-006	OTTHUMT00000050237.1	632	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 26 Transcript length: 7,272 bps Translation length: 1,168 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7559

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 28/02/2014 (Created on 28/05/2003)

Alternative symbols

RP11-446H13.1-001

Remarks

VPS10 domain receptor protein SORCS 1

Other assemblies

This transcript maps to 106,573,663-107,164,534 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000263054

Curation Method

Manual annotation from Havana