Transcript: SORCS1-002 OTTHUMT00000050233.1

Description

sortilin-related VPS10 domain containing receptor 1

Location

About this transcript

This transcript has 19 exons and is annotated with 13 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SORCS1-001	OTTHUMT00000050232.4	7272	1168aa	OTTHUMP00000020446	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7559	Q8WY21
SORCS1-002	OTTHUMT00000050233.1	2638	714aa	OTTHUMP00000020447	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	X6R7D6
SORCS1-004	OTTHUMT00000050235.1	663	213aa	OTTHUMP00000020448	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C2U3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SORCS1-007	OTTHUMT00000050238.2	826	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SORCS1-005	OTTHUMT00000050236.1	629	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SORCS1-003	OTTHUMT00000050234.1	2313	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SORCS1-006	OTTHUMT00000050237.1	632	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 19 Transcript length: 2,638 bps Translation length: 714 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 28/05/2003)

Alternative symbols

RP11-446H13.1-002

Other assemblies

This transcript maps to 106,577,182-106,699,358 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000369698

Curation Method

Manual annotation from Havana