Transcript: COL20A1-001 OTTHUMT00000080130.4

Description

collagen, type XX, alpha 1

Location

Chromosome 20: 63,295,040-63,334,851 forward strand.

About this transcript

This transcript has 35 exons and is annotated with 54 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000032964 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
COL20A1-006	OTTHUMT00000144595.2	4172	1284aa	OTTHUMP00000070554	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS46628	Q9P218
COL20A1-001	OTTHUMT00000080130.4	8097	1297aa	OTTHUMP00000031549	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
COL20A1-004	OTTHUMT00000080133.16	1204	401aa	OTTHUMP00000070555	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
COL20A1-009	OTTHUMT00000315835.2	750	250aa	OTTHUMP00000196031	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
COL20A1-008	OTTHUMT00000315834.1	723	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
COL20A1-005	OTTHUMT00000144594.2	4536	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
COL20A1-002	OTTHUMT00000080131.4	1924	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
COL20A1-007	OTTHUMT00000144596.2	1497	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 35 Transcript length: 8,097 bps Translation length: 1,297 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 28/02/2014 (Created on 11/11/2003)

Alternative symbols

RP11-261N11.13-001

Remarks

KIAA1510

Other assemblies

This transcript maps to 63,295,040-63,334,851 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000422202

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: COL20A1-001 OTTHUMT00000080130.4

Summary

Transcript-based displays