Transcript: Sdc1-002 OTTMUST00000083826.1

Description

syndecan 1

Location

About this transcript

This transcript has 6 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Sdc1-001	OTTMUST00000083825.2	3157	311aa	OTTMUSP00000045098	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS25803	P18828
Sdc1-004	OTTMUST00000083829.2	638	206aa	OTTMUSP00000045103	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CYT6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Sdc1-002	OTTMUST00000083826.1	2311	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Sdc1-003	OTTMUST00000083828.1	342	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Sdc1-005	OTTMUST00000083830.1	855	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 2,311 bps

Class

artifact [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 12/08/2008)

Alternative symbols

RP23-344H23.2-002

Remarks

7420408G11Rik

Other assemblies

This transcript maps to 8,771,413-8,793,062 in GRCm38 (Ensembl) coordinates.

Stable ID not present in Ensembl

Curation Method

Manual annotation from Havana