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Description

cleavage and polyadenylation specific factor 6

Gene

This transcript is a product of gene OTTMUSG00000042016

This gene has 8 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtFlags
Cpsf6-001OTTMUST000001101206526 bp551 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS24193Q6NVF9
Cpsf6-003OTTMUST000001101243819 bp551 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS24193Q6NVF9
Cpsf6-005OTTMUST000001101222227 bp588 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BJW3
Cpsf6-002OTTMUST000001101212200 bp552 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BJ30
Cpsf6-007OTTMUST00000110125449 bp39 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BLM1 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Cpsf6-008OTTMUST00000110127377 bp91 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BLM9 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Cpsf6-006OTTMUST00000110123717 bp182 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BKW0 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Cpsf6-004OTTMUST000001101262749 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 11 Transcript length: 2,227 bps Translation length: 588 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 12/07/2011)

Alternative symbols

RP23-326O5.1-005

Other assemblies

This transcript maps to 117,349,042-117,376,929 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Transcript-based displays